Heatmap of performance metrics for spike-in data sets

Heatmap of performance metrics for spike-in data sets

Usage

plot_stats_spiked_heatmap(
  stats,
  ain = NULL,
  comparisons = NULL,
  metrics = c("Accuracy", "Precision", "F1Score")
)

Arguments

stats

data table with multiple metrics of the DE results (resulting of get_spiked_stats_DE)

ain

Vector of strings of normalization methods to visualize (must be valid normalization methods saved in stats)

comparisons

Vector of comparisons (must be valid comparisons saved in stats)

metrics

vector of Strings specifying the metrics (must be colnames of stats)

Value

ggplot object

Examples

data(spike_in_se)
data(spike_in_de_res)
stats <- get_spiked_stats_DE(spike_in_se, spike_in_de_res)
plot_stats_spiked_heatmap(stats, ain = NULL, comparisons = NULL,
                          metrics = c("F1Score", "Accuracy"))
#> All comparisons of stats will be visualized.
#> All normalization methods of de_res will be visualized.