Get proteins by value in specific column
Usage
get_proteins_by_value(se, column_name = "Reverse", values = c("+"))
Arguments
- se
SummarizedExperiment containing all necessary information of the proteomics data set
- column_name
name of column of which proteins with a specific value should be identified
- values
value of the column defining the proteins that should be identified
Value
vector of protein IDs
Examples
data(tuberculosis_TMT_se)
proteins <- get_proteins_by_value(tuberculosis_TMT_se,
column_name = "Potential.contaminant", values = c("+"))
#> 25 proteins were identified.